bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0011_orf2
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0309 110 6e-23
> 5833.PF10_0309
Length=917
Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query 112 CTCVGGD-IEAPEPAETLEQCSEGDSSLLAPRVVENLKNNLKCRWLLPIQKYAIAVAAKG 170
C G + I PEP +EQ S+ L + +N+ C + IQKY+I V K
Sbjct 509 CKLYGDEKINIPEPLINMEQLSK----LCDEELYKNICLKGYCN-MTTIQKYSIPVILKK 563
Query 171 LDLVACAATGTGKTLAFLSPLVSKCLLHQQLFRPHFAGSHAQASPLAVVLCPTRELAIQI 230
++L+AC+ TG+GKT +FL P++S ++ RPHF GS+A SPL ++LCPTREL IQI
Sbjct 564 INLLACSQTGSGKTFSFLCPIISNLKKENEILRPHFPGSYACISPLCLILCPTRELVIQI 623
Query 231 NEQLARLVVGTTLSHSIWIGGVSATEQVREINQKQ 265
++ L ++ + GG + +QV +IN+KQ
Sbjct 624 QNEVNSLTKNMSIVCMSFYGGETMKDQVAQINEKQ 658
Lambda K H
0.314 0.128 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84358518300
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40