bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0030_orf1 Length=148 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_1950 116 2e-25 > 5807.cgd1_1950 Length=413 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 88/124 (70%), Gaps = 2/124 (1%) Query 18 VFPGKKLVIKDMTFVVWATDPGNGPGFVWKDTAIYISVDPWGEYRRVHILPFADTLPTTY 77 ++ G+K+ I +TF+VWA +P G + +TA+YI+ D +GE++R+H++PF+DTLP TY Sbjct 159 IYVGRKVEIDGITFLVWACEPTQ-VGVIDGNTAVYINWDCFGEFKRIHVMPFSDTLPQTY 217 Query 78 SFRLFEDYLQPFLKEQPWRLIRKGDIFTFRGVEFKVIATEPSTVPVARVGPETVVHFEGM 137 SF +F+DYL+PFL + +G+ FT+ GV+FK+IAT+P+ V AR+G T ++ +G Sbjct 218 SFDIFQDYLKPFLSRYTFHPFSEGESFTYNGVQFKIIATDPAGVK-ARIGDNTTIYCQGS 276 Query 138 QTDS 141 T S Sbjct 277 LTPS 280 Lambda K H 0.324 0.141 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22943761524 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40