bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0035_orf2
Length=122
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd1_1100 84.0 1e-15
> 5807.cgd1_1100
Length=1103
Score = 84.0 bits (206), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query 6 APESRP--QLILGNWSHGGRRSCDPFGGSFSCFESDLYKTILRFFDCRLKKKCWGGVEEE 63
A + +P +L+LG W+H GR SC PFG S SCFE LY ++RF DC LK CW ++
Sbjct 736 ASKEKPIYKLVLGPWTHSGRASCSPFGKSISCFEPALYYDLVRFMDCALKGICWE--NQD 793
Query 64 MPVHYWQTGTAEWREALTFPP 84
+H++Q G +W FPP
Sbjct 794 KNIHFFQVGEEKWYTTDKFPP 814
Lambda K H
0.319 0.137 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22916587881
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40