bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0045_orf2
Length=154
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0087 259 2e-68
> 5833.PF11_0087
Length=366
Score = 259 bits (661), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/153 (79%), Positives = 139/153 (90%), Gaps = 0/153 (0%)
Query 2 TGPLKLEHLLAKGLTKKDLDLLKEGGLHTVECVAFAPLKTLLAIKGISEQKAAKLKQVSK 61
TGPLK+E LLAKG K+DL+LLKEGGL TVECVA+AP++TL AIKGISEQKA KLK+ K
Sbjct 46 TGPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAPMRTLCAIKGISEQKAEKLKKACK 105
Query 62 ELCSLGFCSAQEYLEARANLIKFTTGSVQLDSLLKGGIETGNLTELFGEFRTGKTQLCHT 121
ELC+ GFC+A +Y +AR NLIKFTTGS QLD+LLKGGIETG +TELFGEFRTGK+QLCHT
Sbjct 106 ELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHT 165
Query 122 LAVSCQLPVEQSGGEGKCLWIDTEGTFRPERIV 154
LA++CQLP+EQSGGEGKCLWIDTEGTFRPERIV
Sbjct 166 LAITCQLPIEQSGGEGKCLWIDTEGTFRPERIV 198
Lambda K H
0.317 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23121682173
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40