bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0081_orf2
Length=514
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0054 887 0.0
> 5833.PF08_0054
Length=677
Score = 887 bits (2291), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/512 (82%), Positives = 466/512 (91%), Gaps = 0/512 (0%)
Query 1 NTVFDAKRLIGRKFDDPAVQADMKHWPFTVKAGPGGKPLIDVNYQGSKKTFHPEEISAMV 60
NTVFDAKRLIGRKF + +VQ+DMKHWPFTVK+G KP+I+V YQG KK FHPEEIS+MV
Sbjct 76 NTVFDAKRLIGRKFTESSVQSDMKHWPFTVKSGVDEKPMIEVTYQGEKKLFHPEEISSMV 135
Query 61 LMKMKEIAEAFIGKEVKEAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 120
L KMKE AEAF+GK +K AVITVPAYFNDSQRQATKDAGTIAGLNV+RIINEPTAAAIAY
Sbjct 136 LQKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAY 195
Query 121 GLDKKGHGEMNVLIFDMGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVDFCVQ 180
GL KKG GE N+LIFD+GGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLV+FCV+
Sbjct 196 GLHKKGKGEKNILIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVE 255
Query 181 DFKRKNRSKDPSTNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVSLSRARF 240
DFKRKNR KD S NSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSV++SRARF
Sbjct 256 DFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARF 315
Query 241 EELCMDYFRNSLVPVEKVLKDSGIDKRSVHEVVLVGGSTRIPKIQQLIQEFFNGKEPCRS 300
EELC+DYFR++L+PVEKVLKD+ +DK+SVHEVVLVGGSTRIPKIQ LI+EFFNGKE CRS
Sbjct 316 EELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRS 375
Query 301 INPDEAVAYGAAVQAAILKGVNSSQVQDLLLLDVAPLSLGLETAGGVMTKLIERNTTIPT 360
INPDEAVAYGAAVQAAIL G S+ VQDLLLLDV LSLGLETAGGVMTKLIERNTTIP
Sbjct 376 INPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPA 435
Query 361 KKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDA 420
KKSQIFTTYADNQPGVLIQV+EGERA+TKDNNLLGKFHLDGIPPAPR VPQIEVTFDIDA
Sbjct 436 KKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDA 495
Query 421 NGIMNVTATEKNTGKSNQITITNDKGRLSQGEIDRMVAEAEKYKAEDEANKQRVEAKNAL 480
NGI+NVTA EK+TGK N ITITNDKGRLSQ EIDRMV +AEKYKAEDE N++R+EA+N+L
Sbjct 496 NGILNVTAVEKSTGKQNHITITNDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSL 555
Query 481 ENYCYSMRGTMEDEKIKDKISAEDREAATSAI 512
ENYCY ++ ++ED+KIK+K+ + E I
Sbjct 556 ENYCYGVKSSLEDQKIKEKLQPAEIETCMKTI 587
Lambda K H
0.315 0.133 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 222952784853
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40