bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0127_orf1
Length=271
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0318 194 3e-48
> 5833.PF13_0318
Length=180
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/157 (60%), Positives = 118/157 (75%), Gaps = 5/157 (3%)
Query 59 SVMASASTEK---KKVHLRKAAGHIWSDPTLDEWTENDHRVFCGDLGNEVTDEVLASAFR 115
S M ++ EK KK HLRKAAG +W DPTLDEW END R+FCG+LGNEV+ ++LA+AFR
Sbjct 12 SDMTTSKDEKSNNKKPHLRKAAGIVWKDPTLDEWPENDFRIFCGNLGNEVSSDILANAFR 71
Query 116 KYKSFDKARVVRDKRTGKTKGYGFVSFMDPNDMLKAIKEMNYKYVGNRPIRVLRSKWKDR 175
KYKSF+ A+V+RDKR KTKGYGFVS DP DML A+K MN K++GNRPI V RS+WKDR
Sbjct 72 KYKSFNMAKVIRDKRNNKTKGYGFVSLSDPQDMLDALKTMNNKFIGNRPITVKRSRWKDR 131
Query 176 EIDSQRNKQIAGIVKKVEKNDSKTLRKFKKLGVNING 212
E++SQ+NK +K + +K RKFKK+ VN N
Sbjct 132 EMNSQKNKDFDNFLKNSQL-PTKKFRKFKKI-VNNNA 166
Lambda K H
0.316 0.129 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 87371322525
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40