bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0168_orf1 Length=202 Score E Sequences producing significant alignments: (Bits) Value 9615.ENSCAFP00000015146 112 8e-24 > 9615.ENSCAFP00000015146 Length=223 Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 69/136 (50%), Positives = 88/136 (64%), Gaps = 15/136 (11%) Query 1 DIEVKRSRKNDTSFAFVVFDDKYSVDDAIERRDGMRYGDMCLRVE-------RGGERRGG 53 +IE+K +R FAFV F+D +DAI R+G YG LRVE RGG RGG Sbjct 44 EIELK-NRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGSRGGWPRGG 102 Query 54 RGGGDGGSYGPPRRSAFRVRVHGLPPTASWQDLKDHMRKAGDVGFASVE-NRVGIVEYPT 112 R G P RRS FRV V GLPP+ SWQDLKDHMR+AGDV +A V+ + +G+VEY Sbjct 103 RNGP------PTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLR 156 Query 113 REEMEYAIERLDRSEF 128 +E+MEYA+ +LD ++F Sbjct 157 KEDMEYALRKLDDTKF 172 Lambda K H 0.321 0.141 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48999515920 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40