bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0171_orf1 Length=217 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1880w 82.8 6e-15 > 5833.PFL1880w Length=792 Score = 82.8 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 14/205 (6%) Query 15 YALPIEGTETADSSAVYR----AVPDPSNPTQTMLGEPAIPQFPHIKSTYPLLKEAARIF 70 Y I+GT +SS +YR + T LG PA S Y + + + Sbjct 34 YFEEIKGTGKKNSSNIYRPYNYKINSEFEKTTGFLGIPA-------SSKYEVFCFFCKYY 86 Query 71 GRNLYVGERQPIKDSNSQTTLSDFKYFTYADTLRMVEALGRALDQEVGVPLSHYDEEGLN 130 +GER+ ++ L + + TYA +E AL Q + + +++ G+ Sbjct 87 YNKDLLGERKKEIRGDNDVVLGGYTFKTYAQVKNEIEIFASALYQFEEIEFNIFNDNGIY 146 Query 131 PAPKPLRVLGLRSRTRMDWRLLDFAANYRGIVTVPLYDTLGEPSVKHIVKLTKMEVLAAE 190 ++LG+ S+ R +W + D A + VTVP+YDT+G SV +I K T M+V E Sbjct 147 ---NQFKILGIWSKNRSEWFITDLATSAINFVTVPIYDTIGLNSVIYIFKKTNMKVCCIE 203 Query 191 GSKLDAALQLKKEGFPLKAVISFDE 215 KL++ +++K+E L +I +DE Sbjct 204 AEKLESLIKMKEELVDLSILIIYDE 228 Lambda K H 0.317 0.135 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 57341003262 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40