bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0204_orf1
Length=220
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0071 249 6e-65
> 5833.PF08_0071
Length=198
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/198 (60%), Positives = 141/198 (71%), Gaps = 2/198 (1%)
Query 21 MPFQLPPLPYAKDALEPHISKETLEYHYGKHHATYVNNLNRLTEGKDEASKSLEDLIKTA 80
M LP L YA +AL PHIS+ETL +HY KHHA YVN LN L + A KSL D++K +
Sbjct 1 MVITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAEKSLLDIVKES 60
Query 81 SGGILNNAGQVYNHTFYWNSMKAGGGGSPTGLIAGEIEKSFSSFEAFKEQFSAAAAGHFG 140
SG I NNA Q++NHTFYW+SM GG P G I +I++ F SF FKEQFS GHFG
Sbjct 61 SGAIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFG 120
Query 141 SGWVWLCYCGEQKKVVITQTHDGGVPFRDNSKCFPLLACDVWEHAYYIDRRNDRAAYVKA 200
SGW WL K+VI QTHD G P +DN+ P+L CD+WEHAYYID RNDRA+YVKA
Sbjct 121 SGWGWLA-LNNNNKLVILQTHDAGNPIKDNTG-IPILTCDIWEHAYYIDYRNDRASYVKA 178
Query 201 WWSLVNWDFANENLKKAM 218
WW+LVNW+FANENLKKAM
Sbjct 179 WWNLVNWNFANENLKKAM 196
Lambda K H
0.316 0.132 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 59171035281
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40