bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0210_orf1 Length=167 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.148 110 2e-23 > 5833.MAL13P1.148 Length=2160 Score = 110 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 2/101 (1%) Query 8 DDGCLRVKTEEEDEQIKIIKAGDPFYLCNTDEWNSRGLCAPDDLTSLVHLHEAAVLDSLD 67 D+ + VKTE++D I +K D FYL N D ++S GL AP DLT L HLHEA++L SL+ Sbjct 31 DEDNIIVKTEDDD--IIKLKETDEFYLRNLDLFDSSGLSAPSDLTKLTHLHEASILHSLN 88 Query 68 IRFEVDAIYTFTGQVLIAVNPFKTLKGLYDMQTLKKYLYPL 108 +RF++D IYTFTG +LIAVNPFK +K LY L K++ P+ Sbjct 89 LRFDIDEIYTFTGPILIAVNPFKIIKDLYSDNMLAKHVQPI 129 Lambda K H 0.318 0.133 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 30498925597 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40