bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0261_orf4 Length=351 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0845w 177 5e-43 > 5833.PFI0845w Length=339 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 171/325 (52%), Gaps = 20/325 (6%) Query 39 NWMRRRYSWRLAFFYRLLTTVAIFGTLMTLVLYLLIKSLSFFKNYRCGERAISLIGINFI 98 NW RR SWR +F+Y L+ + + TL+ L+K+ +FF NY C I+ I + + Sbjct 22 NWNYRRPSWRASFYYNCLSFLTGLSIVCTLIFQQLLKTFNFFINYYCEYEYINFILTDLL 81 Query 99 IMICIMSTTGILCIMMARILDMFGNFSIAEFMSLGKWISRLGFMSKWGPWIVAILADCWL 158 I + ++S + +++RI + NF+I +FMSLGKWI R+G KW PW+VA+L W Sbjct 82 IYLTLISLICVFSFLLSRICSILSNFTINDFMSLGKWIERIGCTVKWFPWLVALLIIFWF 141 Query 159 IVSFINTVWILAAPNDWCSRRWNAQAIVAVENCRLWYKGNVKCLSTEQNLQNSESGL--V 216 I++ N + I A PN WC R N + NCRL ++G V +T+ + + + V Sbjct 142 IINVFNIITIYATPNLWCRNRLNVEGSFVANNCRL-FEGRVAACTTDMVERKASDSINYV 200 Query 217 TTCNDGNELLAQKFLSFTPKEGSED---CSFQDLSVCRAYANLREGKSLDWNESPLNK-- 271 CND L + +F P +++ C+F ++++C Y KSL +N + K Sbjct 201 RKCNDLKFLRNHYYFTFVPDLKNKNYTQCTFNNINICILY------KSLIYNHDVIEKIR 254 Query 272 ------CLGDAAVSPDSFHDSLSESSDLYRYLMIYVQGWTITLIGVVCFFIYTKVSSKFD 325 CL + + F+D ++SDLY+Y +++ G +T ++ FF + K +++FD Sbjct 255 KMNIEGCLRNPPKDIEDFYDQGMKTSDLYKYSQLFIIGSNVTFFILMFFFYFLKKTTQFD 314 Query 326 SLFFQPKTKHSNLLFRLGAPQTPFA 350 LF+Q + RL P TP++ Sbjct 315 GLFYQSLHNSDIFILRLLRPLTPWS 339 Lambda K H 0.328 0.139 0.462 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 132114645774 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40