bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0378_orf1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0346 325 2e-87
> 5833.PF14_0346
Length=853
Score = 325 bits (832), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/261 (59%), Positives = 198/261 (75%), Gaps = 1/261 (0%)
Query 83 KPGGERKVQKAIMQQDDTQAEDARLLSHLEKREKTGTDLSLIRSSLSANLVCSSLNDSEV 142
K G ER +KAI DD ED+ + HLE REK D+ +I++SL NLVCS+LND+E+
Sbjct 8 KKGNERNKKKAIFSNDDFTGEDSLMEDHLELREKLSEDIDMIKTSLKNNLVCSTLNDNEI 67
Query 143 EALANAVQFFTFTKGDIVTKQGENGSYFFIVHSGEFEVIVNDKVVNKIVEGQAFGEISLI 202
L+N +QFF F G++V KQGE GSYFFI++SG+F+V VNDK V + +G +FGE +LI
Sbjct 68 LTLSNYMQFFVFKSGNLVIKQGEKGSYFFIINSGKFDVYVNDKKVKTMGKGSSFGEAALI 127
Query 203 HNSARTASIKTLSEKAALWGVQRQVFRETLKQLSSRNFAENRQFLASVEFFQMLTEAQKN 262
HN+ R+A+I ++ LWGVQR FR TLKQLS+RNF ENR F+ SV F MLTEAQKN
Sbjct 128 HNTQRSATIIAETD-GTLWGVQRSTFRATLKQLSNRNFNENRTFIDSVSVFDMLTEAQKN 186
Query 263 VITNALVVQSFRAGQPIVKEGEKGDILYILKSGKARVSINGKDVRLLQKGDYFGERALLY 322
+ITNA V+Q+F++G+ IVK+G+ GD+LYILK GKA V IN +++R+L+KG YFGERALLY
Sbjct 187 MITNACVIQNFKSGETIVKQGDYGDVLYILKEGKATVYINDEEIRVLEKGSYFGERALLY 246
Query 323 DEPRSATIIAEEETVCVSIGR 343
DEPRSATIIA+E T C SI R
Sbjct 247 DEPRSATIIAKEPTACASICR 267
Lambda K H
0.311 0.126 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127948868655
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40