bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0391_orf1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE0610c 85.9 6e-16
> 5833.PFE0610c
Length=260
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query 30 MEQYECSVCCTNCCYCADKKLFSSDVCPHRLCENCLQQQFGGGTTGVISTNAKGACPVCQ 89
M++Y+C C + +KKL+ D+C H++C CL+ K CP+C+
Sbjct 1 MDEYKCISCFEDIYVNNEKKLYFFDICKHKICGECLENHLNKLN--------KQYCPLCK 52
Query 90 RSLTRGNYVLIEPDIDLFSFEKQIRKRVNNALNALRDNFENTPAYNDYLEEKEEAIYELV 149
S+T+ N L + + +++ +K +R ++ N R NFENTP YN+YLE+ E+ IY L
Sbjct 53 VSVTKKNVSLFDIEERIYANQKNVRSKLTEIFNKRRHNFENTPLYNNYLEKVEDMIYVLT 112
Query 150 YGTDEQLKRRLENRLRELE 168
DE+ ++ +E +++ E
Sbjct 113 NECDEKKRKIIEAYIKKYE 131
Lambda K H
0.322 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 47162034073
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40