bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eace_0396_orf1
Length=140
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  10090.ENSMUSP00000000349                                            84.7    8e-16


> 10090.ENSMUSP00000000349
Length=482

 Score = 84.7 bits (208),  Expect = 8e-16, Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 10/74 (13%)

Query  74   IFSISQPRHG----------IVCFKLADIGEGIAAVELTKWYKKEGDTIEEMEEVCEVQS  123
            +F  SQPRH           +V FKL+DIGEGI  V + +WY KEGDT+ + + +CEVQS
Sbjct  44   LFKYSQPRHSLRTAAVLQGQVVQFKLSDIGEGIREVTIKEWYVKEGDTVSQFDSICEVQS  103

Query  124  DKAAVEITSRYPGV  137
            DKA+V ITSRY GV
Sbjct  104  DKASVTITSRYDGV  117



Lambda     K      H
   0.322    0.135    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22914837435


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40