bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0419_orf1
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
290398.Csal_0643 114 7e-25
> 290398.Csal_0643
Length=497
Score = 114 bits (286), Expect = 7e-25, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 91/149 (61%), Gaps = 12/149 (8%)
Query 7 WAVCGIGILPGDKRMSNVLHEQEFLYTVLTR-SQRVCEARVIGALMDFVYAPEEPLRLKG 65
WA+ G+G++PGD RM + L Q+ LYT++ + E RVIG+L+D+++AP++P +
Sbjct 59 WAIIGVGVMPGDTRMRDALAAQDHLYTLVVKHPDGRYEPRVIGSLIDYLFAPDDPEAVIE 118
Query 66 LLLDIRTKLLSLTITEKGYCM-ATNGDLDKSLAAVKQDLALMKCKDIRKQESCTPQTALG 124
+ D +++SLT+TE GY + NG+ D + V+ DLA + TP+T G
Sbjct 119 AMSDPAIRIVSLTVTEGGYNIDPANGEYDLATPDVRHDLASPQ----------TPRTTFG 168
Query 125 LIYLGLKLRRDAKIRPFTVLSCDNIPNNG 153
L+ L+ RR+ I PFTV+SCDNI NG
Sbjct 169 LVIAALQRRRERGIAPFTVMSCDNIEGNG 197
Lambda K H
0.323 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23213563385
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40