bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0426_orf1
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
9544.ENSMMUP00000022889 117 8e-26
> 9544.ENSMMUP00000022889
Length=725
Score = 117 bits (294), Expect = 8e-26, Method: Composition-based stats.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 1/107 (0%)
Query 1 NIFGGMQQQERRDVYVKFKGNKHQVLVATSVAARGLDFPNVGFVINFDLPPTIEVYVHRI 60
+I G +Q+ER F+ K VLVATSVAARGLD NV VINFDLP TI+ YVHRI
Sbjct 570 SIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRI 629
Query 61 GRTGRAGRTGKAVAYFSLK-DRSLASPLIAQLTKAKAPIPPWLDRIA 106
GRTGR G TG+A+++F L+ D LA PL+ LT A+ +P WL+ IA
Sbjct 630 GRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIA 676
Lambda K H
0.322 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23016794144
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40