bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0492_orf1 Length=187 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_2720 66.6 4e-10 > 5807.cgd2_2720 Length=1003 Score = 66.6 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 68/227 (29%) Query 10 LLLLLNLTKLAAHRQKFLAAGGLYPIVDLLMHN-------YASDLPDRRA---------- 52 L L++N++K +HRQ +A G + PI+ +H Y DL ++ Sbjct 748 LSLVVNISKDPSHRQTLIAEG-ILPIIADSLHEILEDFRPYNQDLVLQKNKIHGQFGIHS 806 Query 53 -------LLSALMGVVGQLANDEEARADLIDRFPVVDFVLYAFHT----AGEDVEYKTKI 101 +L ++GV+GQL+N+ + + I + V+D++LY FH G + + KI Sbjct 807 KQNSDWDVLPIILGVIGQLSNENDIKHMFISNWCVLDYILYLFHNLEVYVGSNNDIICKI 866 Query 102 VFALRQLSRSRWQVQQRVCKHLLHSLAAAL--------------------YAF------- 134 +F ++QL S W VQ RV KH + +L + Y++ Sbjct 867 IFCIKQLCNSSWIVQLRVGKHCIPTLIEIISTPLNKKERREASTMKFIQYYSYWVPFHTI 926 Query 135 -----SSVEFVGV-------CLSLLQTLAGYKPNCFDMKAAGIQEAL 169 SS+ G+ L LL+TL+ Y PNC +M + GI+ AL Sbjct 927 SENRDSSIFLSGINGDVIFHSLLLLETLSYYHPNCLEMISFGIENAL 973 Lambda K H 0.327 0.138 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 40588496850 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40