bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eace_0546_orf1
Length=211
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF1185w                                                        229    4e-59


> 5833.PFF1185w
Length=2719

 Score =  229 bits (584),  Expect = 4e-59, Method: Composition-based stats.
 Identities = 98/203 (48%), Positives = 139/203 (68%), Gaps = 7/203 (3%)

Query  10   WCHICRDSVSKSEDSVVECTACPKRFHLECLQQEGIVGQGEVVALSTWLCPQCLEEAEED  69
            WC +CR++  +  D  ++C  C K+FH ECLQ EG++   ++  +  ++C QC+ E ++D
Sbjct  7    WCTLCRENFEEG-DECIQCKQCKKKFHRECLQAEGLMDNEQLKDIKNYVCYQCINE-DDD  64

Query  70   EITNDDKCFLCRKADVDDESGGRLIMCDGCPHSYHMSCLKLTIEPDEEKWFCPDCNPTAF  129
               N+D+C +CR    +  +   L++CDGCP+SYH+SCL L  EP+ EKW+CP C P   
Sbjct  65   IPENEDRCKICR----EKSANLILLLCDGCPNSYHVSCLGLAAEPESEKWYCPICKPDDH  120

Query  130  NTEEIRRLGRGAAVPR-SGDAANSSTCYVCQRPGKLLGCDFCVNSFHPSCLVDVDWNAIG  188
               ++RR+ +G  +   +G+  NSSTCYVCQRPGKLLGCDFC NSFHP+CL D+D++ I 
Sbjct  121  KNLDVRRMRKGFVLDNMNGEHVNSSTCYVCQRPGKLLGCDFCPNSFHPTCLPDLDFDNIS  180

Query  189  EEWECPVCKGFDPLANQMHKRWT  211
            ++WECP CK  DPL NQ HKRWT
Sbjct  181  DQWECPCCKNEDPLLNQGHKRWT  203



Lambda     K      H
   0.322    0.138    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 53680939224


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40