bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0671_orf2
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF0940c 114 8e-25
> 5833.PFF0940c
Length=806
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 30/153 (19%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDE---------------- 44
A KTAGFSGAD+AE+CQRAA+AAIRDAI AEE+ + + E ++
Sbjct 657 AQKTAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELSNKKENEQNETNENDVHNK 716
Query 45 -----------DESNVKYEITRKHFEEGLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAA 93
D+ N+KYEITR HF+EGLAGARRSVSQ DL KYD+FR+KFDP+YK++
Sbjct 717 TEQQANDQQKNDDDNIKYEITRHHFKEGLAGARRSVSQADLIKYDNFRIKFDPLYKTKTG 776
Query 94 GGDGTIIVDWPNTDGAATDVGRVDEGDDDDLYS 126
G I+DWP+ D V D+DLYS
Sbjct 777 GTGDDFIIDWPDEDNNDDTPAYV---VDEDLYS 806
Lambda K H
0.311 0.129 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22588795449
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40