bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0706_orf1
Length=88
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0647 82.4 4e-15
> 5833.PF14_0647
Length=1656
Score = 82.4 bits (202), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 0/75 (0%)
Query 6 GRGLQDAFARLLPFDFVLRIMSAFLFEGSLALCKFSLALVQLLEPELMACDTTEAAERVL 65
R +QD F+R+LPFDFVLRI +LFEG LC + LAL++ LE +++ C E E +L
Sbjct 1375 ARCIQDGFSRMLPFDFVLRIYGIYLFEGQKTLCLYCLALLKFLENDILKCTNIEEVENIL 1434
Query 66 YRCSTDPRLSINELS 80
Y P L INEL+
Sbjct 1435 YHICMHPYLDINELT 1449
Lambda K H
0.324 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23142708390
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40