bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0748_orf1 Length=99 Score E Sequences producing significant alignments: (Bits) Value 5833.PF08_0041 109 2e-23 > 5833.PF08_0041 Length=279 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 72/99 (72%), Gaps = 0/99 (0%) Query 1 KNVTLLQVTKNDPNLFLPIGSRKIAFSSKGRHVDLENFVQQFQHTENPVLFLVGAVAHAN 60 KN+ LL++ KND LPI KI S KG+ V+L N+++ +++T PV F +GAVA++N Sbjct 181 KNIYLLKIIKNDLQNILPINGHKIGLSLKGKKVELNNYIKVYKNTNQPVTFFIGAVAYSN 240 Query 61 PTANNELAEECISISPCGLSAAVCCSSLCTEFENLWNIY 99 PT ++ ++ ISIS LSAA+CCSS+C+EFE+LWN++ Sbjct 241 PTMKLQILDDNISISDFSLSAAMCCSSICSEFEHLWNLF 279 Lambda K H 0.320 0.133 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23144316443 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40