bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0787_orf3 Length=240 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0875w 366 3e-100 > 5833.PFI0875w Length=652 Score = 366 bits (940), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 175/240 (72%), Positives = 209/240 (87%), Gaps = 0/240 (0%) Query 1 IPKIQQLIKEFFNGKEPNRGINPDEAVAYGAAVQAGILSGEGTQDMVLLDVTPLTLGIET 60 IPKIQQ+IKEFFNGKEPNRGINPDEAVAYGAA+QAGI+ GE QD+VLLDVTPLTLGIET Sbjct 365 IPKIQQIIKEFFNGKEPNRGINPDEAVAYGAAIQAGIILGEELQDVVLLDVTPLTLGIET 424 Query 61 AGGVMAKVINKNTVIPTKKTQTFSTYSDNQSAVLIQVYEGERPMTKNNHLLGKFELTGIP 120 GG+M ++I +NTVIPTKK+QTFSTY DNQ AVLIQV+EGER +TK+NHLLGKFEL+GIP Sbjct 425 VGGIMTQLIKRNTVIPTKKSQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIP 484 Query 121 PAPRGVPQIDVTFDVDRNGILNVSAVDKGTGKSEKITITNDKGRLTPDEIERMIQEAEKF 180 PA RGVP+I+VTF VD+NGIL+V A DKGTGKS ITITNDKGRL+ ++IE+MI +AEKF Sbjct 485 PAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKF 544 Query 181 ADEDRKTKERVDARNALEGYIHSMRSTVEDKDKLADKIEDDDKKTITDKITEANEWLVAN 240 ADED+ +E+V+A+N L+ YI SM++TVEDKDKLADKIE +DK TI + +A +WL N Sbjct 545 ADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNN 604 Lambda K H 0.311 0.132 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 70473178052 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40