bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0813_orf1 Length=232 Score E Sequences producing significant alignments: (Bits) Value 5833.PFB0815w 287 2e-76 > 5833.PFB0815w Length=524 Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 144/231 (62%), Positives = 175/231 (75%), Gaps = 3/231 (1%) Query 1 HVSEEAKDLVRRMLTYDPTKRISADECLHHPWIVKFSAEKDTDMPKHALTGALGNMKKFQ 60 ++SEEAK+L++ MLTYD KRI+A E L+ WI K+ A + L GAL NM+KF+ Sbjct 293 NISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKY-ANNINKSDQKTLCGALSNMRKFE 351 Query 61 ATQKLAQAAMLFMGSKLTTVEETKELTTIFRALDKNGDGQLDRKELIEGYRKLLEWKGES 120 +QKLAQAA+LF+GSKLTT+EE KELT IF+ LDKNGDGQLD+KELIEGY L +K E Sbjct 352 GSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNEL 411 Query 121 GEVDEATIEAEVDQILATVDFDKNGYIEYSEFVTVCMDKQLLLSRERLLQAFQQFDSDGS 180 GE+ +E EVD IL VDFDKNGYIEYSEF++VCMDKQ+L S ERL AF FD+D S Sbjct 412 GEL--KNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKS 469 Query 181 GKITNDELAKLFGITAIDDKAWHEVLAECDKNNDGEVDFDEFVEMMQKICD 231 GKIT +ELA LFG+T+I ++ W+EVL E DKN D +DFDEFV MM KICD Sbjct 470 GKITKEELANLFGLTSISEQMWNEVLGEADKNKDNMIDFDEFVNMMHKICD 520 Lambda K H 0.317 0.133 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 65612958876 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40