bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0813_orf1
Length=232
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFB0815w 287 2e-76
> 5833.PFB0815w
Length=524
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 175/231 (75%), Gaps = 3/231 (1%)
Query 1 HVSEEAKDLVRRMLTYDPTKRISADECLHHPWIVKFSAEKDTDMPKHALTGALGNMKKFQ 60
++SEEAK+L++ MLTYD KRI+A E L+ WI K+ A + L GAL NM+KF+
Sbjct 293 NISEEAKELIKLMLTYDYNKRITAKEALNSKWIKKY-ANNINKSDQKTLCGALSNMRKFE 351
Query 61 ATQKLAQAAMLFMGSKLTTVEETKELTTIFRALDKNGDGQLDRKELIEGYRKLLEWKGES 120
+QKLAQAA+LF+GSKLTT+EE KELT IF+ LDKNGDGQLD+KELIEGY L +K E
Sbjct 352 GSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNEL 411
Query 121 GEVDEATIEAEVDQILATVDFDKNGYIEYSEFVTVCMDKQLLLSRERLLQAFQQFDSDGS 180
GE+ +E EVD IL VDFDKNGYIEYSEF++VCMDKQ+L S ERL AF FD+D S
Sbjct 412 GEL--KNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKS 469
Query 181 GKITNDELAKLFGITAIDDKAWHEVLAECDKNNDGEVDFDEFVEMMQKICD 231
GKIT +ELA LFG+T+I ++ W+EVL E DKN D +DFDEFV MM KICD
Sbjct 470 GKITKEELANLFGLTSISEQMWNEVLGEADKNKDNMIDFDEFVNMMHKICD 520
Lambda K H
0.317 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 65612958876
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40