bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0821_orf2
Length=168
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0268 73.2 3e-12
> 5833.PF11_0268
Length=596
Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query 9 VPAAAGGAAAAAEGDGLSLLLFGGVGGEANEVLADPWAFDLKTRAWKPFKSSNTPPARHS 68
VP A E + ++++FGG+ E +E++ + + FD + + W+ + P AR+
Sbjct 231 VPRAFCSGNVITEDNKKNIIIFGGIN-EKDEIVDETYKFDFQAKKWELIGNKICPRARYK 289
Query 69 HAAVYVQQQNKLLIFGGQGEDGRLLKDAYVLEKNTWKALSSASEDLAPSARCCHSGSYCE 128
HA+ + L I GG + LL D + KN+W + D P R HS +
Sbjct 290 HASFSFN--DFLYIHGGLDVNNSLLADMWCFSKNSWTPIKQI--DRIPEPRYAHSLIFSF 345
Query 129 IEGRSYVAVFGGDISGTGKGENDLWLYDINQDAW 162
V +FGG+ G D W+++IN + W
Sbjct 346 YGNAKLVFLFGGNKKGYNAALGDTWIFNINTNRW 379
Lambda K H
0.316 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 30377245073
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40