bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0839_orf2
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI1170c 196 4e-49
> 5833.PFI1170c
Length=541
Score = 196 bits (497), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 124/173 (71%), Gaps = 7/173 (4%)
Query 1 ELTPAAIRAGELLARRLFKNQTEVFCLEHVPTTVFTPVEYGCVGLSEEDAIAKYGEENLE 60
EL P AI+AGE+LARRLFK+ E+ ++PT+++TP+EYG G SEE A YG+ N+E
Sbjct 364 ELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVE 423
Query 61 VYLREFSPLEVSACHRQKIKQRDEEDKGAEDEDEDTSLSPCCLAKLICLRKDKQRVVGIH 120
V+L+EF+ LE+SA HRQK + A+ ++ D +S CLAKL+CL+ + RV+G H
Sbjct 424 VFLQEFNNLEISAVHRQKHIR-------AQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFH 476
Query 121 FVGPEAGEVLQGMALAIRLGATKEDFDSTVGIHPTNAECFMQLQITKRSGENW 173
+VGP AGEV QGMALA+RL K+DFD+ +GIHPT+AE FM L +T SG ++
Sbjct 477 YVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTISSGLSY 529
Lambda K H
0.318 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40134932565
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40