bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0855_orf1
Length=176
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0133 70.9 2e-11
> 5833.PF13_0133
Length=590
Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 50/198 (25%)
Query 18 IAWTSITSKAAYRVQILQMEADGEILGEGEEAFGRTLVDSGTTYSYFPPGVYAAWRRVLN 77
I W +IT K Y ++I ++ G + + +E LVDSG+T+++ P +Y L+
Sbjct 329 IVWQAITRKYYYYIKIYGLDLYGTNIMDKKEL--DMLVDSGSTFTHIPENIYNQINYYLD 386
Query 78 RHCTPSL---------------------------------------FCQREKDGRPCWRI 98
C + C + DG CW+
Sbjct 387 ILCIHDMTNIYEINKRLKLTNESLNKPLVYFEDFKTALKNIIQNENLCIKIVDGVQCWK- 445
Query 99 PSGSFLSL-SLPSIKLTFKEGDVIHWLPQSYLYRRTGGFWCDGLDDNRSQESVLGLSFFK 157
SL +LP++ +T + W P SYLY++ FWC GL+ + + +LGL+FFK
Sbjct 446 ------SLENLPNLYITLSNNYKMIWKPSSYLYKKES-FWCKGLEKQVNNKPILGLTFFK 498
Query 158 HKQIVFDRDKNRIGALNA 175
+KQ++FD +N+I + +
Sbjct 499 NKQVIFDLQQNQIAFIES 516
Lambda K H
0.319 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 35336795289
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40