bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0857_orf1
Length=115
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF0185c 87.8 8e-17
> 5833.PFF0185c
Length=1820
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query 1 LKEIIDMEPEFQLLLKRKLPGSKRGYEVHKMRVSLQLNEVFDIDMVFDSWWFLPDKKMPA 60
LK+II+ EP+ ++LKRK+ +E ++ V +QL+E+F+ M DSWWF+ +MP
Sbjct 257 LKDIIEAEPDMNIILKRKIEKKNIIFETQRLGVYMQLSEIFEFHMALDSWWFISTAEMPT 316
Query 61 KLQQHAKALSLNVPVQGRSMQRSVARTHTSKNNYWSYAGFFSFRGTLPSLSNQY 114
L++ K L P+ R + ++ S NN+W Y G+F F GT L+N +
Sbjct 317 YLKKLPKFLRFKFPLSERDW--IIHSSYNSSNNFWLYPGYFCFIGTYQQLANAF 368
Lambda K H
0.321 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22698934816
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40