bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0887_orf4
Length=190
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0203 62.0 1e-08
> 5833.PF11_0203
Length=1052
Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 22/177 (12%)
Query 8 YQLFSDATAQLVDDEVRNLISNQYERVKALLKEKEK-----------KETLTFADLQDCL 56
Y+ S+ A L+D+EVR+LI QY+RVK++L + EK KET+++ D+ C+
Sbjct 852 YRPHSECLAHLIDNEVRSLIETQYKRVKSILMKNEKHVHNLANLLYEKETISYHDIVKCV 911
Query 57 GTRPFPPDAQLAAYINALPTKVNTVGQEEPGVE-RASGDLRRIPTAISGDRNVRD-EKGS 114
G RP+P + ++ A P K + EP +E + D + T+ G+ N D EKG
Sbjct 912 GERPYPVKSAYEKFVKANPYKAIS---SEPLLEDKKESDNMKGDTSNIGNVNTNDFEKGH 968
Query 115 TSDKDAAADGHSMQQRKQSIKDTEGSNGDDKEPTDAGKNGGKGKKKRNGKGNAADDD 171
+ + + K++ KD N + N K + N GN++ DD
Sbjct 969 IKENTKEC---TKENTKENTKDNTKENTKENTKEYTKDN---TKNQYNILGNSSKDD 1019
Lambda K H
0.305 0.128 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 42433428525
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40