bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0888_orf1 Length=257 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0720w 179 8e-44 > 5833.PFL0720w Length=245 Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 79/146 (54%), Positives = 114/146 (78%), Gaps = 0/146 (0%) Query 112 RVEMTKDMICKGTISALVGVLLGIVSSLIVNCTLVEISVSSFFSVYLGIVFITVGAVILW 171 R++ TKD++ KG++SA+VG++LGI+ SLIVNCTLVE+S+S FFS+Y GI+FI VG +I W Sbjct 15 RIQCTKDLLLKGSLSAIVGMILGIMCSLIVNCTLVEVSLSRFFSMYFGILFIVVGMIIFW 74 Query 172 RINVNADGASQGRRLQLTFFAGLIVFSGVLCFLLKRNWFVGLHAIFKVPLYTVLGVSVAF 231 R+N N ++GR+ QL +GLI+FSG+LCF R+W L + KVP+Y +LG+S++F Sbjct 75 RLNANVTDEAEGRKNQLMILSGLIIFSGILCFFFDRSWLFSLSPLTKVPIYCILGISISF 134 Query 232 ALTFSLVDVVNYLFSFFQSSVAKPLV 257 ALTFSL+D++NYL F Q S+ +PL+ Sbjct 135 ALTFSLIDLINYLIGFIQGSITRPLI 160 Lambda K H 0.326 0.140 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 79865823972 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40