bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0927_orf1 Length=223 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0785c 298 9e-80 > 5833.PFE0785c Length=456 Score = 298 bits (763), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 140/221 (63%), Positives = 185/221 (83%), Gaps = 0/221 (0%) Query 1 ELQRYLTDPEILTSEILFLILTLSNIFVVYRLFLDVVPFPVFVTWWQLAQGLLMAWCLGE 60 +++RY DPE+LT+EILF+ LTL N+FV+YRLFLDV+P+P+FVTWWQLAQGLL+A+ GE Sbjct 13 DIERYFKDPELLTAEILFVALTLCNVFVMYRLFLDVIPYPIFVTWWQLAQGLLVAYVCGE 72 Query 61 VGKEYPKLAYFPRVEINKRLLRRLFVPTIVNALMLVLANVLLYRGQCIATLPVVVAFAVV 120 +G+E+PK AYFP+VEIN+ +L+ LFVP+I LMLVL+N LLY+ CIA+ PV+V+F VV Sbjct 73 LGREFPKFAYFPKVEINENMLKVLFVPSIFYCLMLVLSNYLLYKTPCIASYPVLVSFTVV 132 Query 121 LHHITRFMGCGEEYMPMRWQAVGLLFTAFLLGITDSKTVGSDVLPWALLYAIFSAAFRAA 180 HH+TRF+GCGEEYMP+RW+++ L AF++G DSKT G V+ WALLYA+FSA FRA Sbjct 133 FHHLTRFIGCGEEYMPLRWKSIVFLLAAFIIGCFDSKTTGKGVIVWALLYALFSAIFRAG 192 Query 181 FLQKVMHEVEGKGNLLHNHQHLISVVILPVLMIICGEGSVL 221 F+QK+MH V+GKGN LHN+QHL+ V+ILPVL+++ GE SV Sbjct 193 FMQKIMHLVDGKGNTLHNNQHLLGVLILPVLILLSGELSVF 233 Lambda K H 0.331 0.144 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 61001067300 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40