bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0931_orf1 Length=260 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.343 380 2e-104 > 5833.MAL13P1.343 Length=311 Score = 380 bits (977), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 172/260 (66%), Positives = 215/260 (82%), Gaps = 0/260 (0%) Query 1 PMEVMGLMLGEFIDDFTVRVVDVFSMPQSGNSVSIEAVDYVYQTEMLDQLKRTGRPEMVV 60 PMEVMGLMLGE +D++T+R+VDVF+MPQSGNSVS+EAVD VYQT ML++LK+TGR EMVV Sbjct 52 PMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVSVEAVDPVYQTNMLEELKKTGRHEMVV 111 Query 61 GWYHSHPGFGCWFSGTDVNTQQSFEQLNQRAVGVVVDPIQSVKGKVVMDCFRLINPHFLM 120 GWYHSHPGFGCW SGTDVNTQ+SFEQLN R +GVVVDPIQSVKGKVV+DCFRLINPH LM Sbjct 112 GWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGVVVDPIQSVKGKVVIDCFRLINPHILM 171 Query 121 LGQEPRQTTSNIGHLQRPTITALVHGLNRNYYSITINCRKGELEHQMLANLHKNKWNDAL 180 LGQEPRQTTSNIG+L +PT+TALVHGLNRNYYSI IN RK ELE ML NLHK+ W + L Sbjct 172 LGQEPRQTTSNIGYLTKPTLTALVHGLNRNYYSIVINYRKNELEKNMLLNLHKDMWTNPL 231 Query 181 KLQNFEEHHREREASVAALKDLSAKYISMIEEEIKKKPEQLLVDRAGQIDAKMRLQNTID 240 KL +F E + + ++ +K L+ Y + E+KK E++L++ G+IDAK R+QN+++ Sbjct 232 KLNDFHEQKKSSDETLEDIKKLTTLYNKNLRNEMKKTSEEILLENIGKIDAKKRIQNSVE 291 Query 241 SLLTDTLLQNLGSMISTLAF 260 +LL +++L +G+M +TL F Sbjct 292 TLLNESILTCIGTMANTLFF 311 Lambda K H 0.320 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 81680956335 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40