bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0946_orf1
Length=226
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT1G74230.1 62.0 1e-08
> 3702.AT1G74230.1
Length=289
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query 33 YLQRRGRELNRELSLLAEQVNEAQGITTKSLTKVFVGGLAYSTSRYDLCELFAEVGNIKS 92
+L + GR ++ S + + Q I S +K+FVGG++YST + L E F++ G +
Sbjct 3 FLSKVGRLFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV-- 60
Query 93 IVIPQVDRSIPPDYEGAYSVRGIAFVQFEDAESAKKALQCNGKIVNGRSVVVTPA 147
VD I D E S RG AFV F E A A+Q +G+ ++GR + V A
Sbjct 61 -----VDAKIIVDRETGRS-RGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYA 109
Lambda K H
0.314 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 61967794494
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40