bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_0957_orf1 Length=243 Score E Sequences producing significant alignments: (Bits) Value 3702.AT2G23070.1 379 3e-104 > 3702.AT2G23070.1 Length=432 Score = 379 bits (974), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 169/223 (75%), Positives = 201/223 (90%), Gaps = 0/223 (0%) Query 20 RNPLSRTPALIFEYVNNVDFKTLYPTLQDYEIRYYIYQLLRALDYCHSQGIMHRDVKPHN 79 R+ S+TP+LIFE+VNN DFK LYPTL DY++RYYI++LL+ALD+CHS+GIMHRDVKPHN Sbjct 195 RDQQSKTPSLIFEHVNNKDFKVLYPTLSDYDVRYYIFELLKALDFCHSRGIMHRDVKPHN 254 Query 80 VMIDHEKRELRLIDWGLAEFYHPGHEYNVRVASRYYKGPELLVDLQVYDYSLDMWSLGCM 139 VMIDHE+R+LRLIDWGLAEFYHPG EYNVRVASRY+KGPELLVDLQ YDYSLD+WSLGCM Sbjct 255 VMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCM 314 Query 140 LAGIIFKKEPFFYGHDNYDQLVKIARVLGTDGLYAYLDKYDLSLEKNFLQMIGKHTKKPW 199 AG+IF+KEPFFYGHDNYDQLVKIA+VLGTD L AYL+KY + L+ N ++G+H++KPW Sbjct 315 FAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRIELDPNLTSLVGRHSRKPW 374 Query 200 TKFISSENQHLAVPEAVDLIDKMLVYDHQKRILPKDALKHPYF 242 TKFI+SENQHLAVPEAVD +DK+L YDHQ+R K+A+ HPYF Sbjct 375 TKFINSENQHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYF 417 Lambda K H 0.323 0.140 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 71395206278 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40