bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_0976_orf1
Length=186
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0301 222 6e-57
> 5833.PF13_0301
Length=202
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query 10 ARLEKELQGLQQEREGKNKDDDHDVYAEKWDTDISHWRGRIKGPLDTPYEGGVFILDINI 69
+R KEL LQ+E + K++ ++ A DT+I W G IKGP TPYEGG FILDI I
Sbjct 5 SRSSKELLRLQKELKDIEKENVDEIDAHMKDTNIFEWVGFIKGPSGTPYEGGHFILDITI 64
Query 70 PSDYPYNPPKINFVTKVWHPNVSSQTGAICLDILKHEWSPALSIRTALLSIQAMLADPVP 129
P+DYPYNPPKI F TK+WHPN+SSQTGAICLD+LK+EWSPAL+IRTALLSIQA+L+DP P
Sbjct 65 PNDYPYNPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQP 124
Query 130 TDPQDAEVAKMLIENPDLFKKTARHWTETFA-MNAAESQEDKVKKLREMGFDEETAR 185
DPQDAEVAKM EN L+ KTA WT+TFA + E +ED +KK+ EMGF E+ A+
Sbjct 125 DDPQDAEVAKMYKENYSLYLKTASVWTKTFATVPKLEPREDIIKKITEMGFSEDQAK 181
Lambda K H
0.315 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40752393066
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40