bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1052_orf1
Length=100
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0188 88.2 7e-17
> 5833.PF11_0188
Length=930
Score = 88.2 bits (217), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Query 24 EALAEDTLASRVTAVKFSERLLSSPAVVSGFLSPTLRRMMKATLQGA--------PEAQL 75
+A + L S+ + VKFSERL +SPAVV+GFLSPTLR++MKAT++ +
Sbjct 749 QAYFKQVLGSKCSDVKFSERLTTSPAVVTGFLSPTLRKVMKATMKNSDFNDNTNNSNNMN 808
Query 76 NLASLPATLELNPSHGLITSLYHLR 100
+LPATLELNPSH ++TS+YHL+
Sbjct 809 MFQNLPATLELNPSHTIVTSIYHLK 833
Lambda K H
0.316 0.129 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23067334887
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40