bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1167_orf2
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0143 184 2e-45
> 5833.PF14_0143
Length=2770
Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats.
Identities = 98/242 (40%), Positives = 144/242 (59%), Gaps = 21/242 (8%)
Query 48 PVILDWGLVKEFDSKGQTAFSKLVYSVASMDVMGLMEAFEHMGFMFKEGKGAVVDPEIYM 107
PVI+DWGL+K+ DS + AF KLVY+++ M+V+ ++EAFE MGF FKE DPEIY+
Sbjct 664 PVIIDWGLIKQLDSVMKFAFCKLVYNISCMNVLNIIEAFEDMGFCFKED--FTYDPEIYI 721
Query 108 EALRVAF-----------RQGEVEKNETEALHKAAGETVQAAVKAGITRKKIQEANPLED 156
E L+ F +GE E + +A + I +K + + NP+ D
Sbjct 722 ENLKTYFLSKLEESKSKGNEGEKEFGSANTIDEANKSNKNMEILKNIEKKDVMDKNPISD 781
Query 157 WPKDIIFFVRVASLLHGLCVQLKVHIPFLQIMVRRAQECLFNRYQPPSPLIYTHFLGGRG 216
PKDIIFF+RVASLLHGLC QL V I +L I RRA+E L Y P + I+T +
Sbjct 782 VPKDIIFFMRVASLLHGLCTQLNVKINYLNIFSRRAKEALEKIYIPINNSIHTIPID--- 838
Query 217 AAKCS---LHQRLNRLLQSLVERKLVLGCQVAVCYEGEMIVDAAIGQMGPVDTRPVTPDS 273
KC + +R+++ +++L E+K +LGCQVA+ ++ +++V+ +G D RP+T S
Sbjct 839 --KCPNTFVEKRIHQFIKTLYEKKKILGCQVAIIHKKKLVVNTCVGITSTTDKRPITKHS 896
Query 274 LF 275
LF
Sbjct 897 LF 898
Lambda K H
0.324 0.140 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 89781565905
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40