bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1204_orf1 Length=201 Score E Sequences producing significant alignments: (Bits) Value 5833.PF07_0030 185 7e-46 > 5833.PF07_0030 Length=912 Score = 185 bits (469), Expect = 7e-46, Method: Composition-based stats. Identities = 89/121 (73%), Positives = 104/121 (85%), Gaps = 0/121 (0%) Query 81 EEGSSSEDDMAGPRPMEVTNKLAQKNMDYGFALRPGEGEAIAQFVQEGKRIPRRGEVGLT 140 E +SS+++ GP+P++V KLA K +DYG A+ PGEG+AIAQFVQ+GKRIPRRGEVGL+ Sbjct 774 ESDNSSDNESIGPKPLDVNVKLATKQIDYGVAMMPGEGQAIAQFVQKGKRIPRRGEVGLS 833 Query 141 AEEISNFESLGYVMSGSRHRRMNAIRIRKENQVYSAEEQRALAMLNYEERAARETQLLYD 200 AE I NFESLGYVMSGSRH+RMNAIR+RKENQVYSAEEQRALAM NYEERA RE L+ D Sbjct 834 AEAIENFESLGYVMSGSRHKRMNAIRMRKENQVYSAEEQRALAMYNYEERANRENALIND 893 Query 201 L 201 L Sbjct 894 L 894 Lambda K H 0.318 0.128 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48387021971 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40