bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eace_1234_orf2
Length=138
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF1325c                                                        105    4e-22


> 5833.PFF1325c
Length=449

 Score =  105 bits (262),  Expect = 4e-22, Method: Composition-based stats.
 Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 0/85 (0%)

Query  51   ATRKEGASPFECCICMDEIHDPVVTRCGHLFCWGCLHLWLQQSGDCPICKAAVSADTVTP  110
            AT  E  + FEC IC D++ DPVVT+CGHLFCW CL  W++++ DCP+CKA VS + V P
Sbjct  279  ATENESRNTFECNICFDDVRDPVVTKCGHLFCWLCLSAWIKKNNDCPVCKAEVSKENVIP  338

Query  111  IYGRSSSPKSHAHTRHFSSETPPSR  135
            +YGR  +   H + +       P R
Sbjct  339  LYGRGKNSSDHKYAQPEEPRPTPKR  363



Lambda     K      H
   0.315    0.125    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22344559178


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40