bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1271_orf2
Length=130
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd1_1100 68.9 4e-11
> 5807.cgd1_1100
Length=1103
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query 4 DLQMVGSAFLNLFIKAKHCNEISLFAYLEDVDVAAGFSHYVTEAQVLASNR----PSEVR 59
D+++VGS +L+ ++ + ++ YLED+ Y+TE +R
Sbjct 940 DIRLVGSVWLHFSVQLLDGYDAPIYVYLEDISPENEI-MYITEGLAQIGHRHVNMTKSAL 998
Query 60 DDLPVGSYGRVLRPFSRKSYKPIEE-DEEVNVSVNFEPTAWTFKKGHSLRLLLTGSDLEN 118
+++P GS +V+RP +R Y+P+ +E + + EP WTF K H L + +TG+D +N
Sbjct 999 ENIPHGSARKVIRPLTRSYYQPLRRIGDESPMQITLEPITWTFFKDHRLAISITGADTKN 1058
Query 119 FQLN 122
F+L+
Sbjct 1059 FKLH 1062
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23020010250
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40