bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1275_orf1
Length=283
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0273 230 3e-59
> 5833.PF10_0273
Length=285
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 160/274 (58%), Gaps = 0/274 (0%)
Query 6 MERREDQGKRLARFLPMIVICSVMAILYTVYLLYHCLPMFQFEVPPEYRDRGAIAIGALH 65
M+ K + R LP+++I V ++YT+++ ++C+ + Q V +Y + + G
Sbjct 1 MKEANAYEKDIRRLLPVMLIGLVTVVMYTIFVTFYCMVLLQINVEKQYVNIDLLNEGYTK 60
Query 66 FFVAHAGMAMVLWSFYKTYSTDPGRIPDTHEWERQPNPSLITERKRDGGARYCHKCSKYK 125
H + +++WSFYKTY +PG IPD +EW+ PN I ER++ G RYC KYK
Sbjct 61 LLTFHILLLLLIWSFYKTYKVNPGNIPDNYEWKVDPNIGRIKEREKTGELRYCIHEKKYK 120
Query 126 PDRCHHSSNSGRCVLKMDHYCPWVANDVGFFNYKFFFLTLLYSGATLTFVCSTMAATVSA 185
PDR H+ + VLKMDHYCPWVAN VGF+NYKFF L+L Y+ +V +
Sbjct 121 PDRSHYCRAIEKNVLKMDHYCPWVANCVGFYNYKFFLLSLFYANICCLYVNINCYTSFPN 180
Query 186 SIDDSNISFEQVFFTFLGTALSFFMLAIVAPFCIFHCVLITTNCTTIEFCEKRRTGRPNP 245
+ NI F +VF+ FL L+ +L I+ PF +FH L + N TT+EFC + + N
Sbjct 181 FYSNPNILFNEVFYLFLEIVLASVILIIIFPFFLFHIYLTSKNYTTLEFCVTGQWEKGNI 240
Query 246 YDVGLAENLKQALGDQPLLWPVPVGGPSGDGISF 279
YD+G+ EN KQ LGD LLW P+G P G+G+ +
Sbjct 241 YDLGVEENFKQVLGDNILLWIFPLGKPKGNGLFY 274
Lambda K H
0.328 0.141 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 93612100764
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40