bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1287_orf2
Length=120
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0112b 142 4e-33
> 5833.PF08_0112b
Length=1053
Score = 142 bits (357), Expect = 4e-33, Method: Composition-based stats.
Identities = 71/123 (57%), Positives = 90/123 (73%), Gaps = 4/123 (3%)
Query 1 GVAAAEE---EMDVTELWLHNMIEGIEFVLGSISNTASYLRLWALSLAHQQLSCIFFEKT 57
G A EE E +++E+W+ +IE IEF+LG ISNTASYLRLWALSLAHQQLS +FFE+T
Sbjct 917 GGGAGEENHHEENISEIWIEQLIETIEFILGLISNTASYLRLWALSLAHQQLSFVFFEQT 976
Query 58 VGLAFQPGLSPSQMAFKLIFFFPAFLCITIFVMVAMEALECFLHALRLQWVEFQNKFYKG 117
+ + + S + LI F F +TI V++ M+ LECFLH+LRLQWVEFQNKFYKG
Sbjct 977 ILNSLKRN-SFMSVLINLILFSQLFSILTIAVILCMDTLECFLHSLRLQWVEFQNKFYKG 1035
Query 118 DGV 120
DG+
Sbjct 1036 DGI 1038
Lambda K H
0.330 0.140 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23080484097
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40