bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1293_orf1 Length=156 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1715w 191 5e-48 > 5833.PFL1715w Length=646 Score = 191 bits (485), Expect = 5e-48, Method: Composition-based stats. Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 8/153 (5%) Query 3 SFCFLWCGVKHLEEARNVLTKWGFRRCEDICWVKTNKTASACSSKRQETAPPHSVLRDES 62 SF F+WCGV HLE+AR +L KWG+RRCEDICW+KTN +K + +E+ Sbjct 452 SFLFIWCGVTHLEDARVLLNKWGYRRCEDICWLKTNINEKNKKNKYLNE------INNEN 505 Query 63 SYLHRTTEHCLVGIKGLVRRAQDGHLIHANLDADVIVAEEP-ADFYSTEKPQELYDIIER 121 SYL RTTEHCLVGIKG VRR+ D HLIHANLD DVI+AEE + Y KP+ELY IIE+ Sbjct 506 SYLQRTTEHCLVGIKGAVRRSYDIHLIHANLDTDVIIAEETEQNIYDNNKPEELYKIIEK 565 Query 122 FCLGRKRLELFGLQRNVRDGWLTIGNAIRDTEL 154 FCLGR+++ELFG RN+R+GWLT+G I DT L Sbjct 566 FCLGRRKIELFGTNRNIRNGWLTLGKHI-DTTL 597 Lambda K H 0.323 0.137 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24371502831 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40