bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1349_orf2
Length=143
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0172 134 1e-30
> 5833.PF11_0172
Length=455
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 94/138 (68%), Gaps = 0/138 (0%)
Query 6 PPVFKPIFAFISDSYPLYGSRRKPYMIAFSLLEGLGFIMLGTFPTHVLTALISLFTISIS 65
P + KP+ A I+DS+ ++G RRKPY+ FSL + L F+ L V+ A + LF IS+
Sbjct 86 PFILKPVIALITDSFSIFGMRRKPYLFLFSLFQSLNFLALAFLNLSVIQASLILFFISLC 145
Query 66 AAFCSAVAEALVVETTAGRSMDQSAENVSDFITAKAVGSLIVAYLSGYLLEKTSKQSIFL 125
A+FC+ VAEALVVE++ G++ Q V++FI +KA+GSL VAY SGY LEK ++ IF+
Sbjct 146 ASFCTTVAEALVVESSMGQTYSQGTNKVTEFIASKAIGSLSVAYFSGYFLEKMPREYIFI 205
Query 126 ATSIFPLFIAFITFFMTD 143
ATSIFPL I+ F+ +
Sbjct 206 ATSIFPLIISLSCLFLKE 223
Lambda K H
0.327 0.138 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22654093455
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40