bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1381_orf1 Length=125 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0272 83.6 2e-15 > 5833.PF13_0272 Length=208 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 0/54 (0%) Query 72 LTDANFEQETQAVTGSTSGDWFVKFYAPWCGHCRKMAPAWEELAKKLKGQINVA 125 L D+NFE TQ TG+T+G WF+KFYAPWC HC+ M+ W +LA +LKG+INVA Sbjct 28 LNDSNFESLTQLSTGNTTGSWFIKFYAPWCSHCKAMSKTWAQLATELKGKINVA 81 Lambda K H 0.320 0.128 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22670743557 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40