bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eace_1415_orf1
Length=160
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0108                                                       115    5e-25


> 5833.PF11_0108
Length=1329

 Score =  115 bits (288),  Expect = 5e-25, Method: Composition-based stats.
 Identities = 75/146 (51%), Positives = 95/146 (65%), Gaps = 10/146 (6%)

Query  2    RRRSRREARLKEEIAKLRAEKPTIHQQFADLKMGLTSVTQEEWESIPDIGDYTLKRKQKK  61
            RR+SRRE +LKEEI+K+RA KPTI QQF DLK  L +VT EEWESIP +  Y+ K+KQKK
Sbjct  112  RRKSRRENKLKEEISKMRATKPTITQQFGDLKKNLANVTIEEWESIPTVLQYSSKQKQKK  171

Query  62   QQM-LTPASDRGILEARNRE----SFSNSIAS-AGSATPIGFGMATPLMAGGLSTPLGLQ  115
             Q    PA D  I+   N      +F+NS +S +G  TPIG G  + L   G+ TPLGL+
Sbjct  172  VQKNYLPAPDSLIMSRINESNIHLNFNNSASSQSGHKTPIGLGYQSSL---GVQTPLGLR  228

Query  116  TPLGIQTPL-GLRTPMGSSTPSLNDL  140
            TP G+Q  L GL+TP+     SL+ L
Sbjct  229  TPYGLQNSLSGLKTPLSGLQNSLSGL  254



Lambda     K      H
   0.312    0.130    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 26871144147


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40