bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_1420_orf1 Length=97 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0346 187 9e-47 > 5833.PF14_0346 Length=853 Score = 187 bits (474), Expect = 9e-47, Method: Composition-based stats. Identities = 81/97 (83%), Positives = 86/97 (88%), Gaps = 0/97 (0%) Query 1 ILLDSQGYVKLIDFGCAKKMQGRAYTLVGTPHYMAPEVILGKGYTLTADTWAFGVCLYEF 60 ILLD QGYVKLIDFGCAKK+QGRAYTLVGTPHYMAPEVILGKGY T D WA G+CLYEF Sbjct 670 ILLDKQGYVKLIDFGCAKKVQGRAYTLVGTPHYMAPEVILGKGYGCTVDIWALGICLYEF 729 Query 61 MCGPLPFGNDAEDQLEIFRDILAGKLMFPHYVTDQDA 97 +CGPLPFGND EDQLEIFRDIL G+L FP YVTD D+ Sbjct 730 ICGPLPFGNDEEDQLEIFRDILTGQLTFPDYVTDTDS 766 Lambda K H 0.326 0.145 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22472223870 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40