bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1480_orf1
Length=95
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_3720 74.7 7e-13
> 5807.cgd8_3720
Length=475
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query 2 GHHIKNCPKSSDAKQQKKIRPATGLPSSFLRDI-LPSEIHKYQEVYIKKDGSFAVLKTA- 59
GHHI+ CPK ++ QKKIRPATG+P SFLR I E Y EVY DG+FAVLK A
Sbjct 301 GHHIRVCPKVNEGVSQKKIRPATGIPRSFLRAINFDEEGRLYSEVYCLPDGTFAVLKDAK 360
Query 60 AIGGLSLLGSSLDMRIQRHVGGAAH--------LKCGCCNSIFK 95
+ + L +++ I +H+G + L C C +F+
Sbjct 361 QLSSTAFLTRTVEDTIGKHMGKSKEDTSLVRDSLTCPICARLFR 404
Lambda K H
0.321 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22621220430
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40