bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1568_orf1
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0481 157 1e-37
> 5833.PF11_0481
Length=2755
Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 122/184 (66%), Gaps = 2/184 (1%)
Query 1 DYDHLLFVRSAQIVNRFPGMWDMTKKRMLSKVLHLYQDLFPHLYDFSPPCWSFPEDRARI 60
D+DH +++ +I+NR P ++ TKK+ L+ +L +FP L++F P + PE++ I
Sbjct 1338 DFDHYNYMKKKKIINRIPSIYMYTKKKTLTFLLSHLSLIFPSLFNFYPNTFVLPENKNII 1397
Query 61 EEILQSSKSETYIIKPDGGAMGSGVQLVSRLKDIDSVIWRGEGSYIIQKYISHPRLLNKR 120
+ IL S+ E YI+KPD G+MG GV+++++ DI+ I G SYIIQKYI +P L+ K+
Sbjct 1398 KYILNSNNKEYYIMKPDCGSMGIGVKIINKYNDININILNGYNSYIIQKYIDNPLLMYKK 1457
Query 121 KFDLRVYAAVFAVAGTLKVFVSRVGMARFCTDEYRSPTRRNQNNAFMHLTNYSINKENKE 180
KFD R+Y + K+++S+VG AR CT+EY+ +R N ++HLTNYSINK+N +
Sbjct 1458 KFDFRIYILLLPGKNYPKIYLSKVGFARLCTEEYKK-KKRYICNTYIHLTNYSINKDNDK 1516
Query 181 LFIR 184
+IR
Sbjct 1517 -YIR 1519
Lambda K H
0.324 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40134932565
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40