bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1706_orf1
Length=114
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT3G18000.1 98.6 5e-20
> 3702.AT3G18000.1
Length=491
Score = 98.6 bits (244), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 0/84 (0%)
Query 30 QEALDSRQYSKNGILRYEFVFGRGFVSSGGGDTTAEILEHISLPKSGKAIDVGCGIGGSS 89
Q LD+ QY +GILRYE VFG+GFVS+GG +TT E +E ++L K +DVGCGIGG
Sbjct 238 QRFLDNVQYKSSGILRYERVFGQGFVSTGGLETTKEFVEKMNLKPGQKVLDVGCGIGGGD 297
Query 90 AALADRFSANVLGVDLSANMISIA 113
+A++F +V+G+DLS NMIS A
Sbjct 298 FYMAEKFDVHVVGIDLSVNMISFA 321
Lambda K H
0.314 0.130 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22778399648
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40