bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1939_orf1
Length=105
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF0305c 145 2e-34
> 5833.PFF0305c
Length=155
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 80/105 (76%), Gaps = 0/105 (0%)
Query 1 WTAYIKGPKGSPYQGGRWKLQIICPPTYPLVPPQVVMQTKCFHPNIDFKTGAVCIDILRE 60
W A I+GPK SPY+GG+WKL I C TYP+ PP + TK FHPN++F TG +C+DIL+
Sbjct 33 WQAVIRGPKDSPYEGGKWKLNIKCKSTYPIDPPLITFVTKFFHPNVNFVTGELCMDILKA 92
Query 61 GWTPAWSLHFVCVALTSLLDSPNPDSPLNCDAGNLIRSGDLRGFR 105
W+PAW++ +C A+ L + PN DSPLNCDAGNLIRSGD++GF+
Sbjct 93 NWSPAWTIQSLCRAILFLFNEPNADSPLNCDAGNLIRSGDIKGFQ 137
Lambda K H
0.323 0.143 0.501
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22682427107
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40